Getting paid on time is the most important operational function of any freelance business — and your invoicing software either makes that easier or harder. We tested every major platform by actually sending invoices, collecting payments, and managing client relationships across 90 days. The result: most freelancers are either overpaying for software they underuse or underusing free tools they don’t know exist.
The short version: FreshBooks is the best paid invoicing tool for freelancers who want professional polish and features that actually get invoices paid faster. Wave is the best free option for solopreneurs with straightforward needs. Zoho Invoice is an astonishing free alternative that most freelancers have never heard of. Harvest wins if time tracking is central to your billing model.
In a Hurry? Here’s the Short Version:
- Best overall paid: FreshBooks — client portal, read receipts, time tracking, recurring invoices; designed for freelancers
- Best free option: Wave — genuinely unlimited free invoicing with solid accounting features
- Best free alternative (often overlooked): Zoho Invoice — completely free, powerful, and better than Wave for freelancers tracking multiple projects
- Best for time-based billing: Harvest — built around the time → invoice → payment workflow; $9/seat/month
- Best for in-person + invoice hybrid: Square Invoices — seamlessly connects with Square POS if you also sell in person
- Best for one-time, no-setup invoicing: PayPal Business — universal acceptance, instant setup, but expensive transaction fees
- Best for power users who want everything: Hiveage — recurring billing, retainers, multi-currency, and time tracking from $16/month
Quick Comparison Table
| Tool | Best For | Starting Price | Free Plan? | Key Feature |
|---|---|---|---|---|
| FreshBooks | Freelancers wanting polish + speed | $21/mo (Lite) | No (30-day trial) | Invoice read receipts |
| Wave | Solopreneurs on $0 budget | $0 (free forever) | Yes | Built-in accounting |
| Zoho Invoice | Multi-project freelancers | $0 (free forever) | Yes | Project-based invoicing |
| Square Invoices | In-person + online hybrid | $0 (free) / $20/mo | Yes | POS integration |
| PayPal Business | Quick one-off invoices | $0 + transaction fees | Yes | Universal client acceptance |
1. FreshBooks — Best Paid Invoicing Tool for Freelancers
Rating: 9.3/10 | Price: From $21/mo | Free trial: 30 days | Visit FreshBooks
FreshBooks is the tool we recommend most often to freelancers who invoice regularly and want to get paid faster. The standout feature during our testing was invoice read receipts — you get notified the moment a client opens your invoice, which eliminates the guessing game of whether they even saw it.
The client portal is genuinely useful, not just a gimmick. Clients can view all outstanding and past invoices, make payments, and even approve estimates — all without creating an account. During our 90-day test, invoices sent through FreshBooks were paid an average of 3 days faster than those sent through Wave or PayPal.
Where FreshBooks falls short: it gets expensive once you exceed 5 clients on the Lite plan ($21/mo). The Plus plan ($33/mo) raises that to 50 clients, which is where most growing freelancers land. If you need more than basic time tracking, you will want the Plus tier anyway.
2. Wave — Best Free Invoicing Software
Rating: 8.6/10 | Price: Free (forever) | Visit Wave
Wave is the rare genuinely-free product that does not feel crippled. You get unlimited invoicing, unlimited clients, and full double-entry accounting at zero cost. Wave makes its money on payment processing (2.9% + 60 cents per credit card transaction) and optional payroll services.
For freelancers handling fewer than 10 clients per month with straightforward billing, Wave is hard to beat. The invoice templates are clean, professional, and customizable with your logo. Bank connections work reliably, and the accounting reports are good enough for tax time without needing a separate tool.
The limitations: no time tracking, no project management, and no recurring invoice customization beyond basic scheduling. If you bill by the hour or manage multiple concurrent projects, you will outgrow Wave quickly.
3. Zoho Invoice — Best Free Alternative Most Freelancers Miss
Rating: 8.8/10 | Price: Free (forever) | Visit Zoho Invoice
Zoho Invoice consistently surprised us during testing. It is completely free — not freemium, not limited — and includes features that paid tools charge for: automated payment reminders, project-based invoicing, time tracking, and multi-currency support.
The project-based workflow is what sets Zoho Invoice apart from Wave. You can create a project, log hours against it, attach expenses, and then generate an invoice from the accumulated work — all within the same tool. For freelancers managing 3+ active clients simultaneously, this structure keeps billing organized in a way that Wave simply cannot match.
The drawback is the Zoho ecosystem lock-in. Zoho Invoice works best when paired with Zoho Books, Zoho CRM, and other Zoho tools. If you are already using QuickBooks or Xero for accounting, the integration is less seamless than what FreshBooks or Harvest offer.
4. Square Invoices — Best for In-Person + Online Hybrid
Rating: 8.1/10 | Price: Free / $20/mo (Plus) | Visit Square Invoices
Square Invoices is the natural choice if you already use Square for point-of-sale transactions. The free plan lets you send unlimited invoices with payment processing at 2.9% + 30 cents per card transaction. The Plus plan ($20/mo) adds custom templates, milestone-based invoicing, and automatic payment scheduling.
The real value here is unified reporting. If you sell products in person and also invoice clients for services, Square gives you a single dashboard for all revenue. During our testing, the invoicing interface was simple but effective — we could create and send a professional invoice in under two minutes from the mobile app.
Where it falls short: Square Invoices lacks time tracking, has minimal customization on the free plan, and the reporting is basic compared to FreshBooks or Zoho Invoice. It is a solid tool for businesses that need invoicing as one component of a broader sales operation, not for freelancers whose entire revenue flows through invoices.
5. PayPal Business — Best for Quick, No-Setup Invoicing
Rating: 7.5/10 | Price: Free + transaction fees | Visit PayPal Business
PayPal Business invoicing has one unbeatable advantage: almost every client already has a PayPal account. There is zero friction on the payment side. You create an invoice, send it, and the client pays with one click. No account creation, no entering card details for the first time.
That convenience comes at a cost. PayPal charges 3.49% + 49 cents per transaction for invoiced payments — significantly more expensive than every other tool on this list. On a $1,000 invoice, you are paying $34.90 in fees versus roughly $29.60 with FreshBooks or Wave. Those differences compound quickly over a year of regular invoicing.
Use PayPal Business when a client specifically requests it, or for one-off invoices where setting up a new tool is not worth the effort. For regular invoicing, the fees make it a poor long-term choice.
6. Harvest — Best for Time-Based Billing
Rating: 8.7/10 | Price: $9/seat/mo (annual) | Free plan: 1 user, 2 projects | Visit Harvest
Harvest is built around a single workflow: track time, generate invoice, collect payment. If that matches how you bill clients, nothing else comes close. The time tracking is fast and accurate, the invoicing pulls directly from logged hours, and the integration with Stripe and PayPal for payment collection is seamless.
We particularly liked the team reporting features. If you work with subcontractors or have a small team, Harvest lets you see who tracked what, set budget caps per project, and generate invoices that itemize team member contributions. At $9/seat/month (billed annually), it is reasonably priced for small teams.
The limitation: Harvest is not a full accounting tool. You will need to pair it with QuickBooks, Xero, or FreshBooks for expense tracking, tax reports, and bank reconciliation. If you need an all-in-one solution, FreshBooks or Wave is a better fit.
7. Hiveage — Best for Power Users
Rating: 8.2/10 | Price: Free (5 clients) / $16/mo (Basic) | Visit Hiveage
Hiveage packs an impressive feature set into a mid-range price point. Recurring invoicing, retainer management, multi-currency billing, time tracking, expense tracking, and financial reporting — it covers ground that usually requires combining two or three separate tools.
The retainer billing feature stood out during our testing. You can set up a retainer agreement, log work against it, and Hiveage automatically tracks the remaining balance and generates invoices when it is time to replenish. For consultants and agencies managing ongoing client retainers, this saves significant manual bookkeeping.
The free plan is limited to 5 clients, which is fine for testing but not for real use. The Basic plan at $16/month is where Hiveage becomes practical, supporting unlimited clients and up to 2 team members. The interface is functional rather than polished — it gets the job done but lacks the visual refinement of FreshBooks.
Pricing Breakdown: What You Will Actually Pay
Advertised prices rarely tell the full story. Here is what each tool actually costs when you factor in transaction fees, plan limitations, and the features most freelancers need.
| Tool | Free Tier | Paid Plans | Transaction Fees | Cost on $5K/mo Revenue |
|---|---|---|---|---|
| FreshBooks | None (30-day trial) | Lite $21/mo, Plus $33/mo, Premium $60/mo | 2.9% + 30¢ (credit card) | ~$179/mo (Plus plan + fees) |
| Wave | Full features, forever | N/A | 2.9% + 60¢ (credit card) | ~$148/mo (fees only) |
| Zoho Invoice | Full features, forever | N/A | Varies by gateway (Stripe: 2.9% + 30¢) | ~$148/mo (fees only) |
| Square Invoices | Unlimited invoices | Plus $20/mo | 2.9% + 30¢ (online), 2.6% + 10¢ (in-person) | ~$168/mo (Plus + fees) |
| PayPal Business | Unlimited invoices | N/A | 3.49% + 49¢ | ~$177/mo (fees only) |
| Harvest | 1 user, 2 projects | Pro $9/seat/mo (annual) | Varies by gateway | ~$157/mo (1 seat + Stripe fees) |
| Hiveage | 5 clients | Basic $16/mo, Pro $25/mo | Varies by gateway | ~$164/mo (Basic + Stripe fees) |
Note: Transaction fee estimates assume 5 credit card payments averaging $1,000 each. ACH/bank transfer fees are significantly lower on most platforms. Actual costs depend on your payment mix and client payment methods.
Who Should Use What: A Quick Decision Guide
Freelancers with fewer than 10 clients per month and simple billing needs:
Use Wave (free). You get unlimited invoicing and basic accounting without paying a cent. Upgrade to FreshBooks only when you need client portals, read receipts, or automated late payment reminders.
Service businesses that bill by the hour and need time tracking:
Use FreshBooks (from $21/mo). The time tracking integrates directly into invoicing, and the client portal experience is the most professional on the market. Harvest is an alternative if time tracking is your primary need and you handle accounting separately.
Small teams needing inventory tracking or multi-project management:
Use Zoho Invoice (free). The project-based billing structure handles complex workflows better than any other free tool. Connect it to Zoho Books if you need full accounting later.
Businesses that sell in-person and also invoice clients remotely:
Use Square Invoices (free/$20/mo). The unified dashboard for POS and invoiced payments gives you a complete revenue picture without reconciling multiple systems.
Freelancers whose clients already use PayPal:
Use PayPal Business (free + fees). The zero-friction payment experience is worth the higher transaction fees when your clients prefer it. Just do not make it your default — the fees add up fast.
One workflow tip: if you need to follow up on unpaid invoices via email automation, tools like AWeber can help automate payment reminder sequences outside your invoicing platform. This is especially useful if your invoicing tool’s built-in reminders are limited (looking at you, Wave and PayPal).
How We Tested
We created accounts on all seven platforms and used each one for real invoicing work over a 90-day period. Our testing criteria included: time to create and send a first invoice, payment collection speed, client experience (we surveyed recipients), mobile app quality, integration options, and total cost of ownership at $5,000/month in revenue. We weighted payment speed and ease of use most heavily, since those directly affect cash flow.
Frequently Asked Questions
What is the best free invoicing software for freelancers?
Wave and Zoho Invoice are both genuinely free with no time limits. Wave is better if you want built-in accounting features alongside invoicing. Zoho Invoice is better if you track multiple projects and need more customization. Both let you send unlimited invoices at no cost.
Can I send invoices from my phone?
Yes. FreshBooks, Wave, Zoho Invoice, Square Invoices, and PayPal Business all have mobile apps for iOS and Android that let you create, send, and track invoices from your phone. FreshBooks and Square have the strongest mobile experiences in our testing.
Do invoicing tools integrate with accounting software?
Most do. FreshBooks and Wave include built-in accounting, so no integration is needed. Zoho Invoice connects directly to Zoho Books. Harvest and Hiveage integrate with QuickBooks and Xero. Square Invoices syncs with QuickBooks. PayPal transactions can be imported into most accounting platforms.
How do I choose between invoicing software and full accounting software?
If you only need to send invoices and collect payments, a standalone invoicing tool like Zoho Invoice or Square Invoices is enough. If you also need expense tracking, profit-and-loss reports, tax prep, and bank reconciliation, choose a tool with built-in accounting like FreshBooks or Wave — or pair your invoicing tool with dedicated accounting software like QuickBooks.
Bottom Line: Which Invoicing Software Should You Choose?
- Just starting out and want $0/month: Zoho Invoice — Get Zoho Invoice Free →
- Want free with accounting features: Wave — Get Wave Free →
- Ready to invest in the best freelancer tool: FreshBooks Plus — Try FreshBooks Free →
- Bill primarily by the hour: Harvest — Start Harvest Free →
- Sell in-person AND invoice clients: Square Invoices — Start Square Invoices Free →
- Want maximum features at mid-range price: Hiveage — Try Hiveage Free →
- Client insists on PayPal: PayPal Business — Set Up PayPal Business →